Blog by Peter Kerpedjiev

Blog by Peter Kerpedjiev


I’m a PhD student working on modelling the tertiary structure of RNA molecules at the Theoretical Biochemistry Group at the University of Vienna. If you’re interested, you can find a short form copy of my CV here.


Feel free to email me at pkerpedjiev(at) or follow me on Twitter or Google+. In case you’re interested in updates to my blog, there’s an Atom feed here.

This Webpage

The source code for this web page can be found on github.


forna – A tool for displaying the secondary structure of RNA.forgi – A library for annotating and manipulating RNA secondary structure.bwa-pssm – A short read aligner using position-specific scoring matrices to encode the error probabilities for each base.

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